rs32738271 SNP Detail

Summary

• ID
  rs32738271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:32951363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGCAAAG AGAGGGTCGG
  GCATCCTCTC TCCCGCTGCT GCCTGGTGAA GGACCAGCAG GGACATCAGT CCTCACCCGC
  GGGTTCCAAG TACGCCTTAC ATACTGTTGT CTTGACTGTT TTTGTCTCTC ACTGCCACAG
  CTACTTTTTC AGTACCTAAA AGAGCTCCCC GGGCAGCATA AACTAGGGGG TTACACTCCA
  R
  CAAATGTCTG CAACATCTGG CCTATGTGAG CCTGCCTCAA GAAGAAAAGA AAAAGAACAA
  CTTACTGAGC GATTTAGGAG TGTGGTAAGC CTGGAGCCTA ATGTAAACAA AAGGTTACTT
  CAAAGAATGT GTTTATTTCA AATTCATAGC AGTCCCAATG ACCAGGCTCA GATAATCAAT
  GCTATTTCCA GCCTTATATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45687939	mCV23410943	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss146163660	ENSMUSSNP6310290	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321072561	CHEV_4_33038338	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32738271					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:32951363 () rs orientation: forward

Symbol	Name	Function Class
Ankrd6	ankyrin repeat domain 6	522 bp upstream
Cpgi14106	CpG island 14106	within coordinates
Cpgi14107	CpG island 14107	276 bp proximal
Rr590062	regulatory region 590062	548 bp distal
Rr590063	regulatory region 590063	855 bp distal
Rr590064	regulatory region 590064	32 bp distal
Rr590065	regulatory region 590065	412 bp distal
Tssr41164	transcription start site region 41164	497 bp upstream