rs32728838 SNP Detail

Summary

• ID
  rs32728838
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:120707663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCTGCAG GAACAACAAA TGCTCTTAAC TGCTGAACTC
  TCTGTCTCTC TGTCTCTGTC TCCAGTGCCT CACCCTTTTA TTTGTTTGTT TTGTTTTTGA
  K
  AAAGGTCTTC AGTAGGATTC TATGAACCCA CAGTGTAGAG AGAATAGATT CCTGAAAGTT
  ATCCTTTGAC TTCCAAATAC TTTTGGCATG TATATACAC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45686411	mCV24853930	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
ss147348217	ENSMUSSNP6736901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
ss321286263	CHEV_4_120523071	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32728838					SNP	G	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120707663 () rs orientation: forward

Symbol	Name	Function Class
D4Dcr20	DNA Segment, Chr 4, Derry C. Roopenian 20	55 bp proximal
Rr398441	regulatory region 398441	471 bp upstream
Rr598884	regulatory region 598884	494 bp proximal