rs32725846 SNP Detail

Summary

• ID
  rs32725846
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151039681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGATTTC TAATCCAATC
  CATCACACAT GGCCCCAACA GAGCCTTTGC TTGCCTCTGA AACCTCACAG CCAGGCCTCC
  GTCATTTCTC TCAATAGTCT TACCTCCCAA GCTCCTGCAG AACAGCATGT TACGCGTTGA
  ACGTCCGATG GCTTCTTCAA CGCAAAGTTC TATGTACTTC CAAAATCATC CCTAAAACAA
  Y
  GAGGTCACCA CAATGGTTTG TTTGCTGTTG CTGTGATAAA ACACTGTCCC AAGCCAACTC
  TGGGAAAGGA AGGATTTGAC TTACAGAGTT TAGTCCACCA TCAAGAGGAG TCAAGACAGG
  AGAAGCTCAA GCAGAAGGGG ACAGGAACCA TGGAGGGATG CTGCTCACTG GCTTGCTCCC
  ACAGCTCACT CAGCCTGCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720010	NES11010434	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T	C	T	T	T	C	T	T	C	C
ss148060497	ENSMUSSNP475771	ENSEMBL	ENSEMBL_Sanger	f	SNP		T						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32725846					SNP	C	T	T	T	T	T	C	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720010	NES11010434	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151039681 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	1416 bp proximal