rs32724238 SNP Detail

Summary

• ID
  rs32724238
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151053653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGAATTA ACGATGATTG
  ACCAGTTAGT GATTGTAACA GGCATTGCAT CCCTGAAGCC TTCACTTTCT GATACGGTCT
  ATCCTGAGCT TCCTGCCCTG TGGTCAACTC TGACTCACTT CTTCCCTGTC ACTTCTAAGG
  GATAGAAAGG GGCGAGGCTC ACTGCCCACA CACAGTCAAC ACAGGGCTGG GGATGACACA
  Y
  AGCTCATTGC CTTTGTGCTG GCCTCACCTG TGCGAAGATC AGCACTGCAT TAGAATCAGG
  TGTGGTGGAG AACTGGGAGC CCTGCGCTTG GAGGAGAAGC TCAGGGTGAC TCCTCGGCTA
  CCCAGTAAGT TAGAGGCCAG CCTGGGCTAC CGAGAACCTG AGTTTGATCC CCAGGACCCA
  CACAGGAGGA GGGAACTAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720372	NES11010163	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32724238					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720372	NES11010163	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151053653 () rs orientation: forward

Symbol	Name	Function Class
Gm30120	predicted gene, 30120	within coordinates
Gm68496	predicted gene, 68496	1634 bp upstream
Rr605479	regulatory region 605479	456 bp distal
Rr605480	regulatory region 605480	within coordinates