rs32721761 SNP Detail

Summary

• ID
  rs32721761
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151040774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTCTGTG TTGTAACCTG
  ACAGCTTTCA AACAGTATGC TTTTACTTCA TGTTGCTTGT CCTGGCGGAA AGGTTATAAA
  AGCCGGAGAG CTGTTTGTTT GTTTGTTTGT TTGTTTTTTA TTCATCTTTC TTTAGCTTGG
  GCAATTGGTC CAAACACTCT TCAGGGAGAT TGGCCCAAGG AGGTAATTGT GAAGACTGCA
  Y
  GCTCTGAAAA GGCTCCTCTG ACCTCCCCTC TCACAGGACA TCCCTCTCAG CATGCCCTGC
  CTCTCTCTGT CTCTGCATGT ATTTATGTAT GTCTGCCATA TGCATGCCTA GGACCTGTAA
  GGTCAGAGGA GGGTGTGAAA CCCTTAGGCC TGGAATTCTA GATGGCTGTG AGCAATCGTG
  GGTGCTGGGA ACTGAGCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720046	NES11010446	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	T	T	C	T	T	T	T		T	T	T	C
ss148060554	ENSMUSSNP5171255	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						T				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32721761					SNP	C	C	T	T	T	T	T	C	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720046	NES11010446	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151040774 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	323 bp proximal