rs32720849 SNP Detail

Summary

• ID
  rs32720849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151040639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCTCTTT TTGGGTGGGG
  TCTCAATATA TAGCTCAGGC TGGCCTTGAA CTGGAGACTC TTAGAACACA GCACAGATGC
  CACACCCCGA GTCAGGCAGC CTCCTTGTGG CTCTCTTCCA GACTTGAGTT AAGAAACAGT
  CTGTGTTGTA ACCTGACAGC TTTCAAACAG TATGCTTTTA CTTCATGTTG CTTGTCCTGG
  Y
  GGAAAGGTTA TAAAAGCCGG AGAGCTGTTT GTTTGTTTGT TTGTTTGTTT TTTATTCATC
  TTTCTTTAGC TTGGGCAATT GGTCCAAACA CTCTTCAGGG AGATTGGCCC AAGGAGGTAA
  TTGTGAAGAC TGCATGCTCT GAAAAGGCTC CTCTGACCTC CCCTCTCACA GGACATCCCT
  CTCAGCATGC CCTGCCTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720034	NES11010442	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	C	T	C	C	C	C		C	C	C	T
ss148060535	ENSMUSSNP1111601	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C						C				C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32720849					SNP	T	C	C	C	C	C	T	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720034	NES11010442	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151040639 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	458 bp proximal