rs32720846 SNP Detail

Summary

• ID
  rs32720846
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151040629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATTTCTT TTTTCTCTTT
  TTGGGTGGGG TCTCAATATA TAGCTCAGGC TGGCCTTGAA CTGGAGACTC TTAGAACACA
  GCACAGATGC CACACCCCGA GTCAGGCAGC CTCCTTGTGG CTCTCTTCCA GACTTGAGTT
  AAGAAACAGT CTGTGTTGTA ACCTGACAGC TTTCAAACAG TATGCTTTTA CTTCATGTTG
  Y
  TTGTCCTGGC GGAAAGGTTA TAAAAGCCGG AGAGCTGTTT GTTTGTTTGT TTGTTTGTTT
  TTTATTCATC TTTCTTTAGC TTGGGCAATT GGTCCAAACA CTCTTCAGGG AGATTGGCCC
  AAGGAGGTAA TTGTGAAGAC TGCATGCTCT GAAAAGGCTC CTCTGACCTC CCCTCTCACA
  GGACATCCCT CTCAGCATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720031	NES11010441	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	C	C	C	C	T		C	C	T	T
ss148060529	ENSMUSSNP539662	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C					C				T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32720846					SNP	T	C	C	C	C	C	C	C	C	T	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720031	NES11010441	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151040629 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	468 bp proximal