rs32720551 SNP Detail

Summary

• ID
  rs32720551
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151043517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTCCTGG TCTCCTGATA
  AGAACTCCAC CCTGATGGGA AGCCTCTGAC AGGCTGCCCT GTGTTTCCAG CAGGTCCCTA
  GGGCACCACC CACCTCATGG TGAGAGTCCT GAGATGATGT TCCTGAAGCG ACGAGCAGAC
  CCGCAAGATA CAACATGTGT GTTCCTTGTC TGCAGGAGCA GGAGAGAGAT GGGTATTCCT
  S
  GGTAGAGCTA GTGTCCCAGC CTCTGGTTTG AAGGCCATCA GCTGGGTGGA AGAGCCGTCG
  CTCTTGGACT TTTGATTGAC TGGGTAGCAC CCTCTCTTCT CTATTTCATT CACCCTACAC
  ATTTATTTTA ATGTGTTGAG TAGCATATAT TAATTATACA TAACAACGCT TTCATTATAA
  CACCTTATAT GTATATGTAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720136	NES11010366	PERLEGEN	MM_PANEL2	f	SNP	G		C	C	C	C	C	G	C	C	C	G	C	C	G	G
ss148060653	ENSMUSSNP2999219	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32720551					SNP	G	G	C	C	C	C	C	G	C	C	C	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720136	NES11010366	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151043517 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	1735 bp distal
Rr605470	regulatory region 605470	86 bp distal