rs32720546 SNP Detail

Summary

• ID
  rs32720546
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151043361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGCCATG CTTCCTGGAA
  ATGAAAACAG GAGGTGCCCT TACAGACTAA ACATCCAGGT ATCAGATACG CTTCTCAGAA
  TTCCATAGGA GCTGGGGAAG TGCCCGCTGG CTACACAGAG GCCTTACCAC AACTCAACCG
  GGTGCCTAAT GGGCAGGGCT TCCTGGTCTC CTGATAAGAA CTCCACCCTG ATGGGAAGCC
  W
  CTGACAGGCT GCCCTGTGTT TCCAGCAGGT CCCTAGGGCA CCACCCACCT CATGGTGAGA
  GTCCTGAGAT GATGTTCCTG AAGCGACGAG CAGACCCGCA AGATACAACA TGTGTGTTCC
  TTGTCTGCAG GAGCAGGAGA GAGATGGGTA TTCCTCGGTA GAGCTAGTGT CCCAGCCTCT
  GGTTTGAAGG CCATCAGCTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46720130	NES11010364	PERLEGEN	MM_PANEL2	f	SNP	A		T	T	T		T	T	A	A
ss148060635	ENSMUSSNP1851041	ENSEMBL	ENSEMBL_Sanger	f	SNP		A				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32720546					SNP	A	A	T	T	T	T	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720130	NES11010364	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151043361 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	1579 bp distal
Rr605470	regulatory region 605470	within coordinates