rs32719771 SNP Detail

Summary

• ID
  rs32719771
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151043246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTTGACA GTCTGAGGAA
  GGGCTGGCTG TGTGCGTCCA TCCGGCACAT ACCCAGAGAC TGCTGACGAA GCTGCTGCTG
  CCCTCTCCAG CTCCATCTCT GACTAGTTCA GCCGCCTGTG CCATGCTTCC TGGAAATGAA
  AACAGGAGGT GCCCTTACAG ACTAAACATC CAGGTATCAG ATACGCTTCT CAGAATTCCA
  Y
  AGGAGCTGGG GAAGTGCCCG CTGGCTACAC AGAGGCCTTA CCACAACTCA ACCGGGTGCC
  TAATGGGCAG GGCTTCCTGG TCTCCTGATA AGAACTCCAC CCTGATGGGA AGCCTCTGAC
  AGGCTGCCCT GTGTTTCCAG CAGGTCCCTA GGGCACCACC CACCTCATGG TGAGAGTCCT
  GAGATGATGT TCCTGAAGCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46720124	NES11010362	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	T	T	C	T	T	T	C	T	T	C	C
ss148060618	ENSMUSSNP3803115	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32719771					SNP	C	C	T	T	T	T	T	C	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720124	NES11010362	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151043246 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	1464 bp distal
Rr605470	regulatory region 605470	within coordinates