rs32719109 SNP Detail

Summary

• ID
  rs32719109
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106650633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTTCTTCG GCCACAGTCT AGCCACGATG TCTTTATCAG
  TTTATACCCA CCTGAATTGT CCCATCAGCC TAGGGGCCCT AGAGGACAGG TCTGGCCTGG
  Y
  TCATGCCAAT GTTCCCAAAG TACTCTGGTC CTTTTCATCA TTGTATGACT CTAATGTCAC
  CGTCTACCTG CAGAGAAGCT ACTCCTGGAA TGGCAGGGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45685405	mCV23881959	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147171938	ENSMUSSNP5741729	ENSEMBL	ENSEMBL_Sanger	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32719109					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106650633 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596813	regulatory region 596813	1922 bp distal
Rr596814	regulatory region 596814	419 bp distal
Rr596815	regulatory region 596815	982 bp distal
Rr596816	regulatory region 596816	576 bp proximal
Rr596817	regulatory region 596817	765 bp proximal