rs32718115 SNP Detail

Summary

• ID
  rs32718115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151052980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCCAATAA ACGTGCACCT
  ATTTACTTTT ACGGTGATCT GATCTGGCCT ATCGCGCTGG TGAAAACCTA TTACAATCTT
  CTAGGAAAAG CATAATTTAC CAAAACAGAC TGAAGAAAGG AAATGCATAA ATAAAACTGC
  CGTTGAGAAA GCTGAGGAAG AAGTTACAAT TCCTGCCATG TTAGTCCAGA GGCCCAGGTA
  R
  TCCTTGACAG CCATGGGTGC AGTTATTCCA ATATGTTCCA ACTTCCGTGG GGTACAGGCA
  GGCCTGGAAA GTAGAGGGAG CAGTCTACTT ACTGCCATGT TAATCTAATT GCTTCTGAAA
  TTATTTTTTT TTTAAAGTTT TATTTTATGC GTCTCTTTGC GTGTGTACAC ATGCACCCGT
  GTGCTGGTGC CCATGCAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45685188	mCV24225880	ABI	CRAMUS_MOUSE	f	SNP		A	G
ss46720360	NES11010155	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G	A	G	G	G	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32718115					SNP	A	A	G	G	G	G	G	A	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720360	NES11010155	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151052980 () rs orientation: forward

Symbol	Name	Function Class
Gm30120	predicted gene, 30120	within coordinates
Gm68496	predicted gene, 68496	961 bp upstream
Rr605476	regulatory region 605476	1848 bp distal
Rr605477	regulatory region 605477	1528 bp distal
Rr605478	regulatory region 605478	1760 bp distal
Rr605479	regulatory region 605479	196 bp proximal
Rr605480	regulatory region 605480	513 bp proximal