rs32711430 SNP Detail

Summary

• ID
  rs32711430
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107782134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGGACCTG AGTTTGTTTC TCGGGCTCTG TCCTTATTTA
  GATGACCAGC AGTTAAACAG GAAACTCACT TACCAGCTCC ATACTGAAGA ACTTTTCTTC
  R
  TTGACTGAAG AGCTAAGCAC AGAATTCAAA GCTAGTGGGA ACCAGGGATG TAACTCAGTG
  GGCAGGGTGT TTGCCTAGCA TGCATGAAAC CCTAGGTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45684616	mCV23106235	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147182974	ENSMUSSNP157322	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32711430					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107782134 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14548	CpG island 14548	1165 bp distal
Cpt2	carnitine palmitoyltransferase 2	1348 bp upstream
Rr597092	regulatory region 597092	840 bp distal
Rr597093	regulatory region 597093	1314 bp distal
Tssr42698	transcription start site region 42698	1442 bp upstream
Tssr42699	transcription start site region 42699	1420 bp upstream
Tssr42700	transcription start site region 42700	1322 bp upstream