rs32710530 SNP Detail

Summary

• ID
  rs32710530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135496439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTCTGACAGG TCTGGGCTAG GGTCCTGGTC CTCAGAGCCT GGAGAGATGT GTGCCCAGAT
  TAAGCACTGC CCTCCCCACA GGAGACTTAG CTGGGCCCCT TTCCTAAATA GGGACAGAGT
  GGATGTGCCT CTGTTCCCTG GCCATGGGGA TAAATAGGGC ACCCAGAGAG ACAGCCCAGG
  TCCAAGAAAG GCTGGTCCTG AGGCTGGAGC GCCCTCTGTC TGCAAGAAGG ACACCTTCCT
  TTTCAACGTC AACTGGCTGT GCTAGAGCCC GAAGAGGTAT CTCTGAATTC ACCCCTGAGA
  Y
  ACACACACAC ACACGCGCGC GCGCATGCAC CCATCCACCC AACACCAGTG TACAGGTTCT
  ATACCCAGTA GTCCTAAGTT TACTGGGACA CAGGGCATGT CCAGACAGAA CACTGGCCCC
  TGGCAGCTCT GCCCACAGCA TCTGAGCCTT CTTACAGCCA CAGGACACAG TGACACAGCC
  ACAGGTCAAA CTGATGGAAA GTGAGTCAGC AGCGGTCATG TGGCTCCTGT GCCCACTTGC
  TGTTGACCAT TGTCATATGA CCACACCTCC CAGAGAGAGG GTCAGGAGAC AGGCAGTCTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45683572	mCV22670655	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss147550497	ENSMUSSNP5139977	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32710530					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135496439 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Myom3	myomesin family, member 3			Intron
				Noncoding-Transcript-Variant
Rr602132	regulatory region 602132			within coordinates
Rr602133	regulatory region 602133			74 bp distal
Rr602134	regulatory region 602134			226 bp proximal