rs32699017 SNP Detail

Summary

• ID
  rs32699017
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82457647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCCAATAA TAACAAAGAA
  CACAGGACTT AAGTCTTTCA ATAAAGTACA GATTGGATGA GAAGCTGATC TGGGAGGTGA
  AAGTCCTTCC ACCGTGCAGC ACACTATCGA CATAGCTATG CCAACTTATG ACACTGCACA
  GTCCGGTTCT AAGGAAAGGC CTTTAAGGCA CACATGTTAC AAGCTATAGG AACAATGAAC
  M
  GCTCTGAGGA AGGACCCTCA GCCTGTGAAG CTGCTGAATT AATGATAGTC TAAATGGAAA
  CAGGACAAGA TTATCAAACC AGATTCCTCT CTTGATGAGT AGTTCAGTTC TTTGGGCAAT
  TCCATACCTT TCCAGAATAG ATGCCAACTC TTCTACAGAT AGGGAGAAGA TAGAAACCCC
  CAAATGCCTA CATAAGTAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46716474	NES10748252	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32699017					SNP	A	A	A	A	C	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46716474	NES10748252	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82457647 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13290	CpG island 13290	1596 bp distal
Gm64983	predicted gene, 64983	within coordinates
Rr578786	regulatory region 578786	1766 bp distal
Rr578787	regulatory region 578787	7 bp distal