rs32697620 SNP Detail

Summary

• ID
  rs32697620
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150692536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTGTAGGC CTTCTGCATT
  TTAAATTTAT ATTCTTTAAT TTCCTCAGCC AGGGTTTCCA CCTGGACTAG GTGGCTGGTC
  ATCGTGACCC ATGGTGCCCA GGTTTATTAA TCTGCTCTGG GCGCTTTATT CTTCCATTAC
  CGCTGTTGTA ACTTGTTGAG GAAGCTTGCT GTGGCCTGCA CTATTACACT TACCTTGAGG
  K
  CTCAGCTGTT AAAAGACAAC AAGTTCAGGA GTCAGGTGGA GTGGATCAGC CTGGCTTCTG
  GAACCTTTTT ACTATTTGCT GTCTAGCAAT GGGCTGGTTT CTTACTGTCA CTGATCTCTG
  AGGTCTCCTT TTCTAGTCTA GTTGTGCTGT CTTTTTATAT TATTTAACTT ACGTGTATTG
  GTGTTTTGCC TGCATGTATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46716827	NES11011442	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32697620					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46716827	NES11011442	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150692536 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rere	arginine glutamic acid dipeptide (RE) repeats			Intron
				Noncoding-Transcript-Variant
Rr605351	regulatory region 605351			734 bp distal