rs32697026 SNP Detail

Summary

• ID
  rs32697026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:130004212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAGAAAGG AAAACTGCTT
  GTTTGAAGTC ATGCAGAGGC GCAGGCAGTG CTGCCTCCTT CCACCCACTG GATACTTCCG
  AGGATTACAG CCGTTGGTGG GAGTCACAGT TCCTGTAATT TTCCATTGCC TCCGGCCCAG
  GGTGCACAGG CGCTGCCTTG GTATTGAAGT AGCAAAAGTT GAGTGCCGTT TGGTTCAGTG
  R
  GGGAGCCTCC TTGATGGAAC TCAGTGCTTA AGAGCTTGGT CTCTGGTTGG CACATCCCTA
  CTCTGCCAAC TTGCTTACAG AAATTGGTTG TGAAGACCTG AAGTTTGGTT TCCTGTTCTG
  TAGAATAGGG TCATAGCAGT GCCTACACCA GACTTCACTG TGACATGAGA TAGAGTCAAG
  TGTGGCATGT AGTAAGTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45681356	mCV22590316	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss147460106	ENSMUSSNP996672	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32697026					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:130004212 () rs orientation: forward

Symbol	Name	Function Class
Gm40258	predicted gene, 40258	within coordinates
Pef1	penta-EF hand domain containing 1	Intron
Rr600446	regulatory region 600446	970 bp distal
Rr600447	regulatory region 600447	within coordinates
Rr600448	regulatory region 600448	1917 bp proximal