rs32696897 SNP Detail

Summary

• ID
  rs32696897
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:117117891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC CTCTCACTCT GGGCGTGTGG
  K
  GCTAAACTCA GTAGATGTCA TTTCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45682126	mCV25202702	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147286889	ENSMUSSNP5561187	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss321279001	CHEV_4_116933299	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32696897					SNP	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117117891 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr598098	regulatory region 598098			585 bp distal
Rr598099	regulatory region 598099			727 bp proximal
Tmem53	transmembrane protein 53			Intron
				Noncoding-Transcript-Variant