rs32692316 SNP Detail

Summary

• ID
  rs32692316
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150575348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAGGGGA GTTAAGATGG
  TAGTAGAGGC AGAGAAAGAG AGAGTAGAGA AATAGAGGCC GGCCATGAGC ACATGGAAGC
  CATGGGTGGG GGTGTGAGGA AGGAGCAAGG GGACAGAGCA GGAGGAAGAA GGGAAGAGCA
  AGAGAGGAGC AAGAGCTAGA CTCTCGACCA TGAATTTGAG TGAAGCCGTG CATTTCAAGT
  K
  TGTGTGCCTA CGAGTGCAGC CCATCTTGAG CAGCCTGGTA CCAAAAACAC ACTTGTTCTA
  AGCCTGTGAA AGATGTTGGA TGGGGGAAGG TAGGAAACAC CAGCTGAAGG AAGACTTTAG
  AGGCACGAGC TCATGAGTCT TCGGGAAAAG CCCACGTGGT TGATAATCTT TGGAATCCTA
  AGTTTCTGAT CCAGGTGGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715459	NES11012423	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32692316					SNP	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715459	NES11012423	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150575348 () rs orientation: forward

Symbol	Name	Function Class
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605318	regulatory region 605318	1745 bp distal
Rr605319	regulatory region 605319	574 bp distal