rs32691422 SNP Detail

Summary

• ID
  rs32691422
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150574620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGA GAATGCTGAC TTGTGGTTGT
  K
  GTTGGAAGGA CCTTACTTCC TCCTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45726219	mCV24964425	ABI	CRAMUS_MOUSE	f	SNP		T					G	G
ss46715453	NES11012450	PERLEGEN	MM_PANEL2	f	SNP		T	G	T	G	G		G	G	G	G	G	G	G
ss148053829	ENSMUSSNP6843887	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T						G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32691422					SNP	G	T	G	T	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715453	NES11012450	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150574620 () rs orientation: forward

Symbol	Name	Function Class
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605317	regulatory region 605317	1760 bp distal
Rr605318	regulatory region 605318	1017 bp distal
Rr605319	regulatory region 605319	within coordinates
Tssr40412	transcription start site region 40412	1719 bp downstream