rs32690233 SNP Detail

Summary

• ID
  rs32690233
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150574043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGCTGTTT TGTTTTGTTT GTTTTTACCT CTTGTTTGCA
  GAGAGAGCCC AGGTAGGGGC TGTGACTATG GTTTACTAGG GAGCCAATCA GGATTAGCAG
  R
  TTTTGTGCAG TGGAATTCTT ACTCAGACAG GGAATTAGAG AAATTTGGGA TTGCCTTGCT
  GCCTGTCATT TCCTCTCCCC TTTAGGGTTG GGAACAATTT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46715441	NES11012446	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32690233					SNP	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715441	NES11012446	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150574043 () rs orientation: forward

Symbol	Name	Function Class
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605317	regulatory region 605317	1183 bp distal
Rr605318	regulatory region 605318	440 bp distal
Rr605319	regulatory region 605319	549 bp proximal
Tssr40412	transcription start site region 40412	1142 bp downstream