rs32690172 SNP Detail

Summary

• ID
  rs32690172
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82385613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGCATAA GATAATAAAG
  GAAAACACCC ATTGGGAACC TCCAGTCTCC CCAGGTGTAC ACATAGTCTG CTCATGGATC
  AGTTTGAGCC CAAAGAGAAG ATGTGTGAAT TTAGTCTGTT TAAGTCTTCA TGGGTGGTGG
  AGAAAACCAC CATAAGAAAA TGCAAATTGT CTTGATAGAA GGCTATTTTC TTCCTAGACC
  W
  TAACAGACTG TGTAGAGAGA ATGTCAAGGG CTGTCATTAT CAATTCTAAG ATACACAAGG
  AAGCAAGCTG CTGCCACGGC AGTAGAGACC CTGGTAGCAG GATTCAAGGG GGAAGAGAAG
  CTCACAGAGA GGATGGTAAC ATATGGGTCT ATTTCCTCCT CTTTATGGAA AAACCTATTT
  GAAGCTGATT GATATTCTTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715745	NES10750361	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32690172					SNP	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715745	NES10750361	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82385613 () rs orientation: forward

Symbol	Name	Function Class
Rr578784	regulatory region 578784	37 bp proximal