rs32689576 SNP Detail

Summary

• ID
  rs32689576
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180037545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGCATTCTT AGCCACTGAG
  CCAACTCTCT AGTCCCTTAA ACTGAGTTCT TAAAAAAGTA TGTCAGGCTC TACTAAGTGG
  TAATATAATT TTTTTTCTCT GAAAAACATG TATATTATTT GTGACACCTT TATTGATATT
  TAAAGAAAGA TCAGCTTTTA GCTTAATACT CAATTTGTGT TTCCAGCATA TTCTGTGGGA
  R
  GCAAAACAGG GTTCTGATCC ATGGAAGGTG ACAGTGACTT TTGTGATGGC TCCATGCCTC
  GACCTTATTG ACAACTGTGG TTTAAGGTTT TGCAACCTGC TTGTCCCTTG CTTTCTTGGC
  AAGTGGCTCC ATGTCCTCTC TCCAGGGGCC CTGTTCCTTA TGAGCTGGGA CCATGTCTTG
  TGCCTCTTTC ATAAGCCATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss46715014	NES10671304	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs32689576					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715014	NES10671304	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180037545 () rs orientation: forward

Symbol	Name	Function Class
Gm37336	predicted gene, 37336	1945 bp downstream
Gm57491	predicted gene, 57491	891 bp upstream
Rr372536	regulatory region 372536	23 bp upstream
Rr424411	regulatory region 424411	within coordinates
Rr424412	regulatory region 424412	730 bp proximal