rs32687247 SNP Detail

Summary

• ID
  rs32687247
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150279402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTATAT GGATTATGTG
  AAGTATTCAT ACTACTCTCC TGATTTCTTC TTTTAACTTT AATATTAGTG TGTGTTTGAA
  TGAGGGTCAC ACATGTCAAG GTCAGAGGAC ATCTATGTGG AATTGGTTCT CTATGCAGAT
  TCAAGGGATT GAATAAACTT AGATCACCAT ACTTGCGTGG CAATGTACTT TGCCCACCAA
  R
  CGATCTCAGT GGCTCTTATT TCTGCCTTCT ATTTCTTTTG TGTGCACACA AACATGCCTG
  GCTTTTCACA TGAGGTCCTC ACGTTTGCAC GGAAAACTCT GACTGAGCTA GCTCCCCCAG
  TTCCCGTATC TCTCTCCTTC TTAGCATGGG AAACGTTTTT GTTGAAACGT GAACATATCA
  GACAGTATGT GCAAGCAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45680791	mCV24961230	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148049940	ENSMUSSNP6908900	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32687247					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150279402 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Car6	carbonic anhydrase 6			Intron
				Noncoding-Transcript-Variant
Rr605219	regulatory region 605219			726 bp distal
Rr605220	regulatory region 605220			812 bp distal
Tssr40386	transcription start site region 40386			1149 bp upstream
Tssr44728	transcription start site region 44728			1170 bp upstream
Tssr44729	transcription start site region 44729			1134 bp downstream
Tssr44730	transcription start site region 44730			1164 bp downstream
Tssr44731	transcription start site region 44731			1197 bp downstream