rs32683987 SNP Detail

Summary

• ID
  rs32683987
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180039492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGGGAAGG AAAGGGAATT
  TCGGGATACC TGGAGAAGCA GGATGAAAAT CAAAGGAAAT ATGGCTCACA CAGAACCAAG
  TGAGGTTCTA AATTACAAAT TATCCCTCTT TGGAATTGGA GAGAAATACG TCTATAATCA
  AATCCAAAAG CAAGTAGCCT CCTAGTCCTT TTTGTTCCTA TAAGGAAAGG TCCAAAGACA
  M
  ATTTCATAAA GGAGGGTGTT TATTAACTCA GTCTTTGAGT CTAAGAGGTC AAGACTGAAC
  GGCCTATTAA TTGAGTCTCC AGTGATGACC TCATGGTGAG TGGCGTCACA ATGACACCCA
  CATGCAACGC AAAGTAGGAA GTCAGTGGAT GCAGGAGCAG GCAGGGTCCT TTTATAGCAA
  CTCATTCTTG GAAGGACAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46715032	NES10671311	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32683987					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46715032	NES10671311	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180039492 () rs orientation: forward

Symbol	Name	Function Class
Gm37336	predicted gene, 37336	within coordinates
Rr372536	regulatory region 372536	within coordinates
Rr424411	regulatory region 424411	1399 bp distal
Rr424412	regulatory region 424412	612 bp distal