rs32682268 SNP Detail

Summary

• ID
  rs32682268
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135153825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGGGGTG GCAGGGACAC
  TGAGCGGCCA TGGTTATTAT GACTGTGCTT CTGAGTTCCC CCTTCATTTG TGAGGACACA
  AGGCTGTAGA TACACTATGG CTACACTATG CACATAGACT ACATTTCCTA CTGGTTACGA
  ACTATGGGAT AAAAATAGCA GAGCCTCCCA TTATTCTAAA GCACTCAAGA CAACCTTTGG
  K
  GGGGGGGGAA GCATCTATAC CTGTTTCTGT CACTATCTGG GCACCTACTG CCAGGCACTG
  GGGACAGCGG GGCAAACAGT TCTCCTGTAG GCCCACCCAG TCACATTCTG CAACAGGCCT
  CATCCTGTCT ACTACACTAT CGAATTCTCC AATGCTCCTC TTCCATGGCA CACAAGCCTG
  TTCATGTTGG GGTCCCCACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45679876	mCV25168356	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G	G
ss147546784	ENSMUSSNP5295789	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32682268					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135153825 () rs orientation: forward

Symbol	Name	Function Class
Gm69999	predicted gene, 69999	within coordinates
Rcan3	regulator of calcineurin 3	Intron
Rr367746	regulatory region 367746	179 bp upstream
Rr602028	regulatory region 602028	541 bp distal
Rr602029	regulatory region 602029	237 bp proximal