rs32679855 SNP Detail

Summary

• ID
  rs32679855
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150412268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGAGGGG TGTGTATGAG
  TGCTTCTGTG AGTGTGTGTT CTGTTGTGCA TGCAGGACTA GTGGGAGGCC AGAAGAGGGC
  ACCAGATCCC TTAGACCTAG CGTTTCTGTT CTCCTGAGGG GGTGTTTGAC ATTCCTCTAA
  ACCAGTTTCT AGACGGTGGT GACTGATAAA ATAAATGTAA GTGACACTTA AGAATTAAAA
  Y
  GAATTTGACT CATGGTAGTG CTTTTCTTCG TGATTATTGA TTTGGGATGG TGTGTATTTA
  GTTATGGACT GAGCGTTTCA TCATTTTGTA CAGGCTGACC TTGAGCTCTT GGAGCCTCAG
  CCACCAAAAC AGCTGGAATT CCAGATGGGA TTCCAAGCTA ATTCTGCCAG CATTTTCATG
  TGGGGTATGA CTCCCAGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46713603	NES10993751	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32679855					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713603	NES10993751	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150412268 () rs orientation: forward

Symbol	Name	Function Class
D030004A10Rik	RIKEN cDNA D030004A10 gene	892 bp upstream
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605276	regulatory region 605276	115 bp distal