rs32678938 SNP Detail

Summary

• ID
  rs32678938
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150411665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAT TAAGAATTTG GGAATACAAG
  R
  AGAGACTGAT TTTTAGAGAA GAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss45715730	mCV24962269	ABI	CRAMUS_MOUSE	f	SNP		A	G				A		G
ss46713594	NES10993830	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G		A	G	G	A		A	G	G		G
ss148052177	ENSMUSSNP5012928	ENSEMBL	ENSEMBL_Sanger	f	SNP			G						G
ss321429018	CHEV_4_149701317	CHEVERUD	SCREENING_POP	f	SNP												G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs32678938					SNP	A	A	G	G	G	G	A	A	G	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713594	NES10993830	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150411665 () rs orientation: forward

Symbol	Name	Function Class
D030004A10Rik	RIKEN cDNA D030004A10 gene	1495 bp upstream
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605276	regulatory region 605276	467 bp proximal