rs32677935 SNP Detail

Summary

• ID
  rs32677935
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150396853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGGTGGA ATCTGGAATT
  CAAATGAGAA ACATGGATGG GAGACGTGCA ACTGGGTGTC CTTGACAGAT GTCATTAAAA
  CTGGAAAACT GGAAGATATT AGTTATGCCT TGTGTATAGA GATGTCAAAA AACAAGTCCT
  TGGAATGTTA AAATCAACAA CAGAAGTTAA GATAGGATTG GCAAAAGGAG AAAACCAAAA
  K
  ATTGTAGACT CTCATCTTTC AAAGTCATAC AAAGACTGCT AAATCAGGGC AGATTGTTAC
  TGAGAATTGG ATTAATGCAT TGGATACAAT GCTTTGTGGG ATTCAGGGAG AATCTTTCAA
  GAGTAATCTC AGTAGAGTGC TTGGATTAGC AACTTTATAA GGGCAGGGCA GTGGTGGCGC
  ACACCTTTAA TCTCAGCACT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46713489	NES10994731	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32677935					SNP	T	T	T	T	T	T	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713489	NES10994731	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150396853 () rs orientation: forward

Symbol	Name	Function Class
Gm68610	predicted gene, 68610	767 bp upstream
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605274	regulatory region 605274	778 bp distal
Rr605275	regulatory region 605275	542 bp distal