rs32676453 SNP Detail

Summary

• ID
  rs32676453
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135747204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAGCAGGA ATCCCAAAAA
  CACAGGTGTG GAATCAGCCT TTTGGCTAAT AATGGTCTGG AAGCAAGATT TGGTTGCAAA
  TTCAATACTG CTCTATAATC ATCTTGCCAC TTCACAAACC TGTGAGAGCT TGCTATGTTA
  AAAGGAGGTT GGAAAGCCAG CGTGCAGGCT TGCAATTTTC TCTTTGCAGT CAGCGTGTTT
  Y
  TGAATATCAA CGTTTCAGGT CCTTTGCACA GGGGTCTCTC AACAGTTTCC TCACCTCTCT
  CTTCACAACA CATTCAGTTC TCCCTCCCCA GTGGGTACAG AAGCCAAGAG CTCACATAGC
  TGCTACTGAA ATACATCCCC AGCCCCAAGG TAATTTTCTC TCTGGGAAAT GAAAAGCCAA
  ATTAGGGCTG TCAGAGGTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45680114	mCV24785962	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147555998	ENSMUSSNP4333034	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32676453					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135747204 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15090	CpG island 15090	1053 bp proximal
Eloa	elongin A	Intron
Gm24362	predicted gene, 24362	1407 bp upstream
Rr398604	regulatory region 398604	1778 bp upstream
Rr602239	regulatory region 602239	698 bp proximal
Rr602240	regulatory region 602240	1860 bp proximal
Tssr44023	transcription start site region 44023	1736 bp downstream
Tssr44024	transcription start site region 44024	1792 bp downstream
Tssr44025	transcription start site region 44025	1829 bp downstream