rs32676195 SNP Detail

Summary

• ID
  rs32676195
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150368329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCCCTGCT TTCTGCTGCT
  TGCTCTTTTC CATCTGTGTA AAGATCAACT CTGTCATGGT GGTCTTGCAC TCTCTGCTTT
  CCATTCCTTG AGACCCCTGG CTCTGTTAGG GGCAGATTTG TTCACTTGAT TTTTATTTTG
  CTGAGTGTGA CTGGGGCCTT TATAAGTAGA AATAGGTTGT CTCAGTTAAA ATGATAAAGA
  Y
  TATTTGAGGT TAATATGTTG CAGTATTTTG TGTGAGTGTG TGTGAGTGTG TGTGTGTGTG
  TGTGTGTGTG TAAGAGAGAG AGAGGGAGAG AGAAATTGAT TTGATTGATG GTCCTTGATC
  CTTGACTTAT CAATATAGTT TTTCCCCTCA ATAGTGTTTT AAGAAAAGAT CTGGTTTTCT
  GGTTGGGGAC TGAGGTAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46713114	NES10996833	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32676195					SNP	C	C	C	C	C	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713114	NES10996833	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150368329 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15350	CpG island 15350	1475 bp distal
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr377419	regulatory region 377419	1599 bp downstream
Rr605265	regulatory region 605265	1274 bp distal
Rr605266	regulatory region 605266	89 bp distal
Rr605267	regulatory region 605267	62 bp proximal
Rr605268	regulatory region 605268	297 bp proximal
Tssr40404	transcription start site region 40404	1066 bp downstream