rs32674966 SNP Detail

Summary

• ID
  rs32674966
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:81013953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTCCCTT CTTGTTAGAC
  TGAGTGGAGC CCAGCCTAAC CTGGGCAATC GCTGGGGCCT CAATTCTACA TAAAGTTTCT
  TTGGTTGGCA ATCTCACCAC ATCTGACAAC TCGGTAAAGG GTCTTAGCAG ATACCTTGGA
  TGCCCAGATA CTGGAGAAGA GCCTTTGGAG TCTCTTCTCT GCAGGAAATT TAAGATGCTC
  R
  TTTGGTTCCA AGTCACCTTG GCCTTCCTGG AATGTTCTGG ACCCATTATA CCCTTGCTAG
  ATTTTCAGCC TCAGAGCTGA CACCCTGCCA GTCAGATGAC TGTGGTTCTG AGGAACTCTT
  TCATCGAAAT CTATTCTCCT TTACAGTGAT CCTGTAGAGA CTTCTGGGAG TTCAGGGGTG
  TCTAACATAC CTCTGGACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47197671	NES11209913	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32674966					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47197671	NES11209913	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:81013953 () rs orientation: forward

Symbol	Name	Function Class
Rr469066	regulatory region 469066	702 bp distal
Rr469067	regulatory region 469067	795 bp proximal
Slc10a1	solute carrier family 10 (sodium/bile acid cotransporter family), member 1	Intron
Tssr116910	transcription start site region 116910	453 bp downstream
Tssr116911	transcription start site region 116911	802 bp downstream
Tssr116912	transcription start site region 116912	816 bp downstream
Tssr116913	transcription start site region 116913	857 bp downstream
Tssr116914	transcription start site region 116914	896 bp downstream
Tssr116915	transcription start site region 116915	1608 bp downstream