rs32671775 SNP Detail

Summary

• ID
  rs32671775
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:133850195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT CAGTTCCCAT CTCTGAAAAT
  R
  TGAAGGAATA TGAATAACCC TTACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45678887	mCV24805399	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147518440	ENSMUSSNP1512376	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss321345436	CHEV_4_133678799	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32671775					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133850195 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr367738	regulatory region 367738			1514 bp downstream
Rr367739	regulatory region 367739			1378 bp upstream
Rr370577	regulatory region 370577			859 bp downstream
Rr601567	regulatory region 601567			952 bp distal
Rr601568	regulatory region 601568			1065 bp distal
Rr601569	regulatory region 601569			715 bp distal
Rr601570	regulatory region 601570			98 bp distal
Rr601571	regulatory region 601571			937 bp proximal
Rr601572	regulatory region 601572			1164 bp proximal
Rr601573	regulatory region 601573			1230 bp proximal
Rr601574	regulatory region 601574			1713 bp proximal
Tssr39532	transcription start site region 39532			1049 bp downstream
Tssr39533	transcription start site region 39533			1024 bp downstream
Tssr39534	transcription start site region 39534			1626 bp upstream
Ubxn11	UBX domain protein 11			Intron
				Noncoding-Transcript-Variant