rs32671104 SNP Detail

Summary

• ID
  rs32671104
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150307817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAATAAAT TTGACTGACC
  TGTCTGCTCT GCCTGTGGTC TGTGAACTTT TCACGCAGAC AAGTGTCTTC CAATTTTGAG
  CAAGTAACAT CTCGTAACTC ACAGACTCTC AGCCTTGATC CAGGTGACCA CGAGGAGGCT
  GGGGGGCATC TATGTGTGCA CACGCAGAGG TCAGGGGTCA GACGTTGAAT CCGGCGACTT
  Y
  CTCTGCAGTT CTCCGCCTCC GTTTTCTTTT TAAAAGCTTT ATTCAATTTG TTACTATTAT
  TCGTGTGTGT GTGCGCGCGT GTGTGCGTGC ATGAGTGAGT GTGTACACAT GATACACATG
  TACAGGTCAG AGGAAAAGTT TGTGGAGTCA GTTTTCTTTT TCCACCTTTA CTTGGGCTTC
  AGGAGTCTAA CTCAGATCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712571	NES11000147	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32671104					SNP	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712571	NES11000147	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150307817 () rs orientation: forward

Symbol	Name	Function Class
Rr605233	regulatory region 605233	1685 bp distal