rs32671085 SNP Detail

Summary

• ID
  rs32671085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150299889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGGGTGA GGGTGTCAAA
  TCCCCTGGAA CTGGAGGTAC ACACAGTTGT GAGCTATCAT GTGGGTGCTG GGAATTGAAC
  CTGGGTCCTC TGGAAGAGCA GCCAGTACTC TTAACCATTG AGACATCTCT CCAGCCCCTT
  GTTTTATGGT TTTTTTTTTT AAGGCAGGAT ATAATAAAAA AGTATGCATT TCATATTACC
  Y
  TTTATTCAAT CTTATTCAAT ATATTGTATT GAGCTGGCCT CACACTCACT GTTGTAGAAT
  ATGCTGTCCC AGCATAAATA ACAGACACTG CCATGTTCTG TGACTACAAA ATGTGACACA
  GTCAAGACTG GACCTGCTGG GCACTGGAGA GATGGCTCAG TGCTTCAGAG CAGCACCTGC
  TGTTATTGCT GAGAACCTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712511	NES11000482	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32671085					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712511	NES11000482	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150299889 () rs orientation: forward

Symbol	Name	Function Class
Rr605225	regulatory region 605225	1562 bp distal
Rr605226	regulatory region 605226	1246 bp distal
Rr605227	regulatory region 605227	1305 bp distal