rs32671047 SNP Detail

Summary

• ID
  rs32671047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150369798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCATGGATG CAATGACCAG
  TTAGAGGGGG CAGATGTCTA TTCTAGAGTG GTCATTCTTA AGAAAGCCAT TGCTAATTCA
  CTTTAGGTCT GAAAGCTTGT CTCATAGTCC TTAAGGTTGA GCACCTTTAC GGCGTAGCGC
  AAACAGTTCA AACGTATTTA CTTAGTGGGT ATATACTCAT GTACCTTCCG GTCAGTGTAG
  R
  CTCTGTCAGG GTTTTGTTGA AAACAGACTG GAGTATCCAG AAGCCAATTT GAGCCAAAAA
  GGTTAACTAA ATCAAGAAAT AAAATATTCC AGTACTTTTT TTTTTTTGTT TTGTTTTTGT
  TTTTTCGAGA CAGGGTTTCT CTGTGTAGCC CTGGCTGTCC TGGAACTCGC TCTGTAGATC
  AGGCTGGCCT CGAACTCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46713141	NES10996718	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32671047					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713141	NES10996718	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150369798 () rs orientation: forward

Symbol	Name	Function Class
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605266	regulatory region 605266	1558 bp distal
Rr605267	regulatory region 605267	898 bp distal
Rr605268	regulatory region 605268	1151 bp distal
Tssr40405	transcription start site region 40405	1171 bp upstream