rs32670573 SNP Detail

Summary

• ID
  rs32670573
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150353242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCTGTAA TTGTTGTTGT
  TGTAGTCGCT GTTATTTTGA TGCAACAAAC TGGCCGCAGA TGCTCTTTCT AAGCGCACTA
  CAGTTACTCA TATTACCTAG GTCTACGGTT TGAACACGGC TTGTCCTCTT TGAAACTCTT
  GTGGAAATTT GGTCATCCAA GAGGTGGAGT TGTCAGGGGG TAATTAGGTC GTCAAGGAGG
  S
  TCAATGTCCT TGAAGAAGTG TGTAGTCCCA AGGGAGGAGA TTACTAATAA GAAGCTGCTT
  CTCCGGCCCA CACCCTTCCT TGCTGTGTTT TTTTCCATGA TGACCTCTAA GCTCTCCCGA
  CAAGTCCAGG CAGCATGAGC CTTTACCAGA GGCTGAGCAG ATGCAGTATC ATACTGGATT
  TCTGGACTCC AGAGCTGAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46713039	NES10997422	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32670573					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713039	NES10997422	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150353242 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15349	CpG island 15349	173 bp proximal
Rr377418	regulatory region 377418	within coordinates
Rr605259	regulatory region 605259	1562 bp distal
Rr605260	regulatory region 605260	within coordinates
Rr605261	regulatory region 605261	366 bp proximal