rs32670298 SNP Detail

Summary

• ID
  rs32670298
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150369726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCAGAGT CTTCTGAATT
  TATGTGCAAT TTCATAAATA ATCTGTTGAT AAATGCCTCC CAGGAGTTTA TTGTCATGGA
  TGCAATGACC AGTTAGAGGG GGCAGATGTC TATTCTAGAG TGGTCATTCT TAAGAAAGCC
  ATTGCTAATT CACTTTAGGT CTGAAAGCTT GTCTCATAGT CCTTAAGGTT GAGCACCTTT
  W
  CGGCGTAGCG CAAACAGTTC AAACGTATTT ACTTAGTGGG TATATACTCA TGTACCTTCC
  GGTCAGTGTA GACTCTGTCA GGGTTTTGTT GAAAACAGAC TGGAGTATCC AGAAGCCAAT
  TTGAGCCAAA AAGGTTAACT AAATCAAGAA ATAAAATATT CCAGTACTTT TTTTTTTTTG
  TTTTGTTTTT GTTTTTTCGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46713132	NES10996715	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32670298					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713132	NES10996715	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150369726 () rs orientation: forward

Symbol	Name	Function Class
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605266	regulatory region 605266	1486 bp distal
Rr605267	regulatory region 605267	826 bp distal
Rr605268	regulatory region 605268	1079 bp distal
Tssr40405	transcription start site region 40405	1243 bp upstream