rs32668491 SNP Detail

Summary

• ID
  rs32668491
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150202468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT ATTTCCCTAC TTAGAGGCAA
  Y
  TTAAGGGCTG GAGAGAGGGC TCAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46711908	NES11005919	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	C	C	T		C	C	C	C		C
ss148047950	ENSMUSSNP1420795	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
ss321428275	CHEV_4_149492120	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32668491					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711908	NES11005919	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150202468 () rs orientation: forward

Symbol	Name	Function Class
Gm13093	predicted gene 13093	within coordinates
Rr605185	regulatory region 605185	371 bp distal
Rr605186	regulatory region 605186	992 bp proximal
Rr605187	regulatory region 605187	1242 bp proximal
Rr605188	regulatory region 605188	1283 bp proximal
Rr605189	regulatory region 605189	1642 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	1333 bp upstream
Tssr40372	transcription start site region 40372	1264 bp upstream
Tssr40373	transcription start site region 40373	1327 bp upstream