rs32668447 SNP Detail

Summary

• ID
  rs32668447
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGAA TGTATTTTGA GGTGGGGCTC AGTATGTATA TCTCTGGTTA TCTTGCAATT
  CACTAGGAAG ACCAAGCTGG TCTCAAACTC ACAGAGATCC CCCTGCCTCT GCCTCCTGAG
  TCCTGGGATT AAAGGTGTGC GCTATCACAC TCAGCCCCCA GTGTCTTTTT GGCATGACTG
  Y
  TATATTCTTT TTCCATTTGT CATTCTCTGG GCTCGAAACA TGCTTAAGCG TGTAGATAAG
  ATGGCTCTGT AGGTAAAGAT GCTTGTAACC AAGGCTGACG CCTGAGCTAG ATCCTTGAAC
  TGGCGTTAGA AAGAAAACTG ACTCCCATAA GGTGCCTTCT GACTTCTGTC TGTGACTGGA
  GAGGGCTGGC TACTTTTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46712304	NES11002254	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32668447					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712304	NES11002254	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270430 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	1042 bp downstream
Rr605217	regulatory region 605217	540 bp proximal
Rr605218	regulatory region 605218	747 bp proximal
Tssr40380	transcription start site region 40380	1443 bp upstream
Tssr40381	transcription start site region 40381	1452 bp upstream
Tssr40382	transcription start site region 40382	1470 bp upstream
Tssr40383	transcription start site region 40383	1484 bp upstream
Tssr44720	transcription start site region 44720	1417 bp downstream