rs32665896 SNP Detail

Summary

• ID
  rs32665896
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114329569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCC TAGCTTCCCT GGTCCAGATG
  W
  GTCATCCCTG CTGAGCCTGG CTCAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45678022	mCV24881810	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	T
ss147269393	ENSMUSSNP2522993	ENSEMBL	ENSEMBL_Sanger	f	SNP		T			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32665896					SNP	T	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114329569 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597579	regulatory region 597579			within coordinates
Rr597580	regulatory region 597580			10 bp distal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant
Tssr42814	transcription start site region 42814			1467 bp upstream