rs32665225 SNP Detail

Summary

• ID
  rs32665225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150207139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCC CTCAGCTGTC CTTCCATGCA
  Y
  GAACCCTGGG GGTTAGGAGA AGCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45702416	mCV24960512	ABI	CRAMUS_MOUSE	f	SNP	C	C	T			T	T
ss46711959	NES11005603	PERLEGEN	MM_PANEL2	f	SNP	C		T	C	T		T	T	T		T	T	C		T
ss148048112	ENSMUSSNP7085218	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T				T
ss321428300	CHEV_4_149496791	CHEVERUD	SCREENING_POP	f	SNP										C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32665225					SNP	C	C	T	C	T	T	T	T	T	C	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711959	NES11005603	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150207139 () rs orientation: forward

Symbol	Name	Function Class
Rr605189	regulatory region 605189	1709 bp distal
Rr605190	regulatory region 605190	568 bp distal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	Intron
Tssr40374	transcription start site region 40374	1977 bp downstream