rs32665015 SNP Detail

Summary

• ID
  rs32665015
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150173022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGCCAGA ATCTCCCAGC
  AAGGTGTGGG TGGGTGCAGA ACTTGCCCAT AGGAAGAGGT CTGCCATTTA GAAAGGAATT
  GGAGACAGTC TGTGCCCTTT GCCTCCTACT TCACCGCGAT CTGGCAGTCT CTGCTGCCCA
  TGGAGAGAAG TTCCAGTCTG CAGGCTAGAA GATGAGTTAG GTGGCTGCCC TGGCCTAAAA
  R
  CCCACAGCTT CCAATTCTAT ACCACAGTGG TTGTGGTGCG TCCAGCCACT CTCAGACGAT
  AGTGTGCCAA CTGTAAAATG CACAGAGGTA TGCTTCTTTA AGCTTTTCAC GACATTTATA
  AACTTCAGGC CCCCATTACC TGCACTTTCT TAGACGCTTT TAAAAAAGAT TTATTCATTT
  TATTTTATGT GTGTGAACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711503	NES11007492	PERLEGEN	MM_PANEL2	f	SNP	A			G	G	G	G	G	G	G	A	G	G	G	G
ss148046926	ENSMUSSNP5252363	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32665015					SNP	A	A	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711503	NES11007492	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150173022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15345	CpG island 15345	64 bp distal
Gpr157	G protein-coupled receptor 157	Intron
Rr398878	regulatory region 398878	1133 bp downstream
Rr605172	regulatory region 605172	1190 bp distal
Rr605173	regulatory region 605173	831 bp distal
Rr605174	regulatory region 605174	495 bp distal
Rr605175	regulatory region 605175	492 bp proximal
Tssr40369	transcription start site region 40369	1024 bp downstream
Tssr40370	transcription start site region 40370	896 bp downstream