rs32664224 SNP Detail

Summary

• ID
  rs32664224
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150170704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAATATGCAA GCTGGATCTT GCACAAGTAT CTCCATCCCT
  AAGAAATACA AAATGTTCAA ACAAGAAAAA AAAAAAAAAC CTCTGTAAAC TGGGAACTAT
  S
  CTTCCTTACT TTTTTCTTTT CATGTAACAT ATTTAAAATT ACATTTTTTT AAATTTATGG
  GTATGGGGGT ACGCCAGCCA CAGGTGTGGA GGTCAGATGT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711491	NES11007505	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	C	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32664224					SNP	G	G	G	G	G	G	G	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711491	NES11007505	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150170704 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15345	CpG island 15345	846 bp proximal
Gpr157	G protein-coupled receptor 157	1256 bp upstream
Rr398878	regulatory region 398878	884 bp upstream
Rr605170	regulatory region 605170	578 bp distal
Rr605171	regulatory region 605171	660 bp distal
Rr605172	regulatory region 605172	628 bp proximal
Rr605173	regulatory region 605173	1466 bp proximal
Rr605174	regulatory region 605174	1778 bp proximal
Tssr40369	transcription start site region 40369	1266 bp upstream
Tssr40370	transcription start site region 40370	1399 bp upstream