rs32663962 SNP Detail

Summary

• ID
  rs32663962
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150145092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTAAGAG CCAGGGAAGT
  TGGTTGTGTT TGTGGGATTT TTTTTTTTAG GCCTTCTATC CAAGGCCTGG TGTGGGGGAA
  AGACAGAAGC CCGACTATGT GAACAGAGGG GTCAGAATCC TAGGTGGACT ACTGGAGCCT
  GCCCAGGGTA CTGACCCCGT GTGGAGGACC GGCTCCTGGA ACGAGGCCTG GCGTGTCAGT
  Y
  GGTTCCTCTT GGGGTAGCTG AGCGAAGGTG CTGGCTTTGA GTTGAGGCTT CATAAAGTGT
  TCCTCGCAGA CAGGCACACC CTGCGTGAGG CCCGAGACCT GCCGGGCCAC TCCCAGCCGC
  GGGCAGCTGC CTCCTGTTGC TGTGTGAATT CCATCAGGGC GACTCTCTGC TCCTTCCTCT
  GCCTCTCTAC TACCTTAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46711206	NES11008239	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32663962					SNP	C	C	C	C	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711206	NES11008239	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150145092 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Rr398877	regulatory region 398877	436 bp downstream
Rr605161	regulatory region 605161	within coordinates
Rr605162	regulatory region 605162	762 bp proximal
Rr605163	regulatory region 605163	1249 bp proximal