rs32663309 SNP Detail

Summary

• ID
  rs32663309
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150144235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCAGGCTG GGGTCTGTTT CCTTGCAGAG ACAAGGAGCC
  CACAGGCTTG CCCTTGCTAC AGGGAGGAGC TCTTACAAGC AAGGACCCTC AGAACTGAGG
  R
  TCACCTGAGT CACTGTCGGT GAATTCCACA GAAGGAAAGG GGCTTTCAGA GGGTGGGGGC
  AGCTTCTCCA CCACAGGGCT ATTAACATTT AGATCAAAGT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss46711188	NES11008304	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs32663309					SNP	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711188	NES11008304	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150144235 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Rr398877	regulatory region 398877	120 bp upstream
Rr605160	regulatory region 605160	1706 bp distal
Rr605161	regulatory region 605161	117 bp proximal
Rr605162	regulatory region 605162	1619 bp proximal