rs32663189 SNP Detail

Summary

• ID
  rs32663189
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150169683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGAGGA ACGAAGATAC
  TTTACAGCGA GGGAATCTTG AAAATATGCC AAGTGAAGGA AACCAGACAC TAAAATCAGT
  GCACCATATA ATCCCATTTA TAGGAAGTAT CCAGAGTAGG CATCCATAGT CACATTAAGA
  AAATTAGTGG TTGCCAGGCT AGGGGGAGAA TTTGGGAGTA ACGGCTAGTG AACACTTTTT
  W
  AAAAATATAT GTTTATGCAG CTATTTAATT TGTACTTAGA TTTCACATCG AAATTTCACA
  GGTTTTAAAT GGCCATTTTG TGGTTTTCAA CATTAATATA GAATTATTTC TTGGATTTCT
  GAATATTTGA TATGAAATTC TTTTTTTCCC CTTTTGATTG AAAATAGATT TTCTCATTCA
  CAACATCCTG ATCACAGTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711485	NES11007530	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32663189					SNP	A	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711485	NES11007530	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150169683 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15345	CpG island 15345	1867 bp proximal
Rr398878	regulatory region 398878	1905 bp upstream
Rr605170	regulatory region 605170	260 bp proximal
Rr605171	regulatory region 605171	340 bp proximal
Rr605172	regulatory region 605172	1649 bp proximal