rs32662643 SNP Detail

Summary

• ID
  rs32662643
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150157010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTGAAAA GAAATGCCCT
  TTAAACAAAT TAATCTTTTT TAAAAGGCAA AGTCCAGACA GGACATCAGT TAAGTGGGGG
  CCTGCACCAA TGACCTCATT TTAATCTAAT CACCTCCTGA AAAACTGTGT CTCCAGTCAC
  CTTGTGAGAC GGGAGCCAGC ATCTTAGCAA CTGAATTAGA GGGCAGGCAT ATGGAGGACA
  Y
  GCAGTGTACA GAGGACCTTT TTGGATACTT TGTAATCCAG TTGGAATAGT GCCACAGTAT
  TACTTCTGGT CCGAGGCACA GATACCAATT CAGGGCTTGT CTCCATCTCC CCGTCCCTAG
  GAAGAGGCCT TGGTGAGCCT GTGATACAGA CAGCGGTAGT TGCGAAGGGT ATGAGCTGCG
  GGAATTCATC CTGGCTTTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46711380	NES11007821	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32662643					SNP	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711380	NES11007821	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150157010 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	751 bp downstream
Gm37795	predicted gene, 37795	1556 bp downstream
Rr605164	regulatory region 605164	1979 bp distal
Rr605165	regulatory region 605165	37 bp proximal
Rr605166	regulatory region 605166	706 bp proximal