rs32662641 SNP Detail

Summary

• ID
  rs32662641
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150156815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGGCTGA AAAGTTGGCT
  CAGTGGTTAA GAGCACCGAC TGCTCTTCCA GAAGTTCTGA GTTCAATTCC CATCAACCAC
  ATGGTGGCTC ACAACCATCT ATAATGGGAT CCGATGCCCT TTTCTGGTGT GTCTGAAGAC
  AACAGCCACA GTGTGCTCAT ATACATTAAA TAATTTTTTT TTTAAAAAAT GTACTTGTTT
  R
  AAAAGAAATG CCCTTTAAAC AAATTAATCT TTTTTAAAAG GCAAAGTCCA GACAGGACAT
  CAGTTAAGTG GGGGCCTGCA CCAATGACCT CATTTTAATC TAATCACCTC CTGAAAAACT
  GTGTCTCCAG TCACCTTGTG AGACGGGAGC CAGCATCTTA GCAACTGAAT TAGAGGGCAG
  GCATATGGAG GACATGCAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711377	NES11007865	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32662641					SNP	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711377	NES11007865	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150156815 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	556 bp downstream
Gm37795	predicted gene, 37795	1361 bp downstream
Rr605164	regulatory region 605164	1784 bp distal
Rr605165	regulatory region 605165	232 bp proximal
Rr605166	regulatory region 605166	901 bp proximal