rs32662639 SNP Detail

Summary

• ID
  rs32662639
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150156157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGGATTA AAGGCGTGCG
  CCACCACCGC CCGGCTACAA AACTTTTAAA AAATAACAGA GAGGTATCAT GATAATGTTA
  GTTTATTAGT GCTGGGGTAT GGCCAGGGCC TGCGTTGTGT TTAGTAGCTC TGCACCCCTG
  GGCTCCACTA CCAGCCCCTG TGCTAATCAA TGCCTTTGTA GGTGCTGGTG TAGGAAGGTC
  M
  CAGCAGAGGA AGCTCTGTGT CGGACAAGTG TGGAAGTTCT GTACTGTTCT TATTCCATCT
  GCTAAGAATT TTCCAAAATA AAACATTTGC TAAAAGCAAA AATGAGTATC AGTGCATTTG
  TATACTGGGG CCCTTAAAGA ATGTCCTGTC CTCAGATCTG AGTTTGAGAC CAGCCTGGTC
  TACATAGGGA GTTCCCAGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46711374	NES11007897	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32662639					SNP	A	A	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46711374	NES11007897	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150156157 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Gm37795	predicted gene, 37795	703 bp downstream
Rr605164	regulatory region 605164	1126 bp distal
Rr605165	regulatory region 605165	890 bp proximal
Rr605166	regulatory region 605166	1559 bp proximal